Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015817970.1_cds_XP_016499391.1_13320
CDS Infomation

[gene=LOC107818001] [db_xref=GeneID:107818001] [protein=inactive protein kinase SELMODRAFT_444075-like] [protein_id=XP_016499391.1] [location=join(60329..60509,60998..61152,61227..61321,61425..62452,62864..63024,63279..63355,63423..63570,63695..63844,64168..64404)] [gbkey=CDS]
Sequence

ATGAGTAAAGAGATGAAGAAAGGAAAACAGGATATGAGTTGTGATGCTGCTGAGAAAATG
ATGGTGGCTGTTAAGGCTTCTAAGGAAATACCCAAAACAGCTCTTGTGTGGGCTTTGACT
CATGTTGTTCAGCCTGGGGATTGCATTACGCTTCTTGTGGTTGTACCTTCACAAAGCTCT
GGTAGGAAGCTATGGGGTTTCCCTAGGTTTGCTGGAGATTGTGCCAGTGGCCACTGGAAG
TTGCACTCTGGAAGTAGTTCCGAGCACAAATCCGACATAACAGATTATTGCTCCCAGATG
ATCCTTCAGCTCCATGATGTTTATGATCCCAACAAGATAAATGTCAAGATTAAAATTGTT
TCTGGTTCACCACATGGAGCTGTGGCTGCAGAGGCAAAGAAGACTCAAGCTAGTTGGGTC
GTTTTGGACAAACATCTCAAGCACGAGAAGAAACGCTGTATGGAAGAGTTGCAGTGCAAT
ATTGTAGTCATGAAGCGATCTCAACCAAAAGTTCTCCGCTTAAATTTAGTTGGCTCACCT
AAAAAGGAACCTGATGTGATAGGCACGTTATCTTCTGAGCAAACTCAAACATGTGGAAAA
GAATCGAACAAAAAGGATTCGTTGGATTCCTCTCGAGGTCCACTAGTAACTCCAACAAGT
AGCCCAGAGATGTTCAGTACAACTGAAGCTGGTACTTCATCCGTTTCAAGCTCTGATCCT
GGAACTTCACCATTTTTTGTCGCTGAAGTAAATAGGGATATGAAGAAAGCAGATTTGTCG
GCTGCTAAGGAAGATCAAGATGTAGATGAATCGAGTTCAGAGAGTGAGAGTGAAAATTTA
TCTGCGTCATCAAGTTTAAGGTTCCAACCATGGATGGTGGATATGATCACTTCACATTCT
GAACTCTCGCAAATCAAAGGGAAGAGCTCGTTGAGAACTCATGACAGGCCACAAGATTCC
ACAAATAAGGCATTGCTGCGGAAGTTTAGTAAGCTTGATGATGAAGGTGATTTTGGATCC
CCGAGTTGCAGATCTGATTTGGAGTACAGTGGTAATGTGAGAGAAGCAGTTTCGCTATCT
AGAAGTGCACCTCTTGGCCCTCCTCCCTTGTGCTCAATTTGTCAACACAAGGCGCCTGTA
TTCGGAAAACCTCCTAGGTGGTTCGCTTACGCTGAACTGGAGCTTGCAACAGGAGGATTT
TCTCAAGCCAATTTTTTGGCTGAGGGAGGATACGGATCTGTTCATAGAGGAGTCCTTCCG
GATGGTCAGGTTGTTGCTGTTAAGCAACACAAATTGGCAAGTTCTCAAGGGGATCAAGAG
TTTTGCTCGGAAGTGGAAGTGCTCAGTTGTGCTCAGCACCGAAATGTTGTAATGTTGATA
GGATTCTGTATCGAGGACAGCAGAAGACTGCTCGTATACGAATATATATGCAATGGATCT
TTAGATTCTCATCTATATGGTCGTACTAGAGATCCTTTGGAATGGTCTGCTCGTCAAAAG
ATTGCTGTCGGTGCTGCCCGAGGTTTACGTTATCTTCATGAAGAATGCAGAGTGGGCTGC
ATTGTCCACCGAGATATGAGACCCAACAACATTCTCATAACCCATGACTTCGAACCACTA
GTTGGAGACTTTGGTTTAGCTAGGTGGCAACCTGATGGTGACACAGGTGTTGAGACGAGA
GTAATTGGAACATTTGGGTACTTGGCGCCGGAGTATGCTCAAAGTGGCCAGATTACAGAA
AAAGCTGATGTTTACTCATTTGGAGTGGTACTGGTGGAGCTTGTTACAGGACGCAAGGCG
GTGGATCTTACCAGGCCTAAGGGCCAGCAATGTCTCACAGAATGGGCGCGTCCATTATTG
GAAGAATGTGCAGTTGATGAGCTAATAGATCCCCGGCTAGAGAACTGCTACTCCGAACAT
GAAATATACTGCATGTTGCATGCTGCATCTTTGTGCATACGACGGGATCCTCAGGCCAGA
CCTCGCATGTCTCAGGTACTGCGGATACTTGAAGGCGACCTCATCGTGGAATCTGGTAAA
CTGTCAGCAACACCTGCTTATGATGTTGGAAGCCAAAGTGGAAGAATTTTGTCAGATTCG
CTGCAACAGTACCAAAGGTTCAGTGGTTCCTTGTTAAGTGATGGATTAGAGGGCTTTAGT
GCTAAGCTCTCATTTGACAAAAGGAGTCCCTCCAATATTTGGGATAGGGATCCATCCAGG
AAAGCATATTAG

Peptide Sequence

PEP ID

XP_016499391.1
PEP Infomation

PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Nicotiana tabacum]
Sequence

MSKEMKKGKQDMSCDAAEKMMVAVKASKEIPKTALVWALTHVVQPGDCITLLVVVPSQSS
GRKLWGFPRFAGDCASGHWKLHSGSSSEHKSDITDYCSQMILQLHDVYDPNKINVKIKIV
SGSPHGAVAAEAKKTQASWVVLDKHLKHEKKRCMEELQCNIVVMKRSQPKVLRLNLVGSP
KKEPDVIGTLSSEQTQTCGKESNKKDSLDSSRGPLVTPTSSPEMFSTTEAGTSSVSSSDP
GTSPFFVAEVNRDMKKADLSAAKEDQDVDESSSESESENLSASSSLRFQPWMVDMITSHS
ELSQIKGKSSLRTHDRPQDSTNKALLRKFSKLDDEGDFGSPSCRSDLEYSGNVREAVSLS
RSAPLGPPPLCSICQHKAPVFGKPPRWFAYAELELATGGFSQANFLAEGGYGSVHRGVLP
DGQVVAVKQHKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCIEDSRRLLVYEYICNGS
LDSHLYGRTRDPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPL
VGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKA
VDLTRPKGQQCLTEWARPLLEECAVDELIDPRLENCYSEHEIYCMLHAASLCIRRDPQAR
PRMSQVLRILEGDLIVESGKLSATPAYDVGSQSGRILSDSLQQYQRFSGSLLSDGLEGFS
AKLSFDKRSPSNIWDRDPSRKAY

Transcript Sequence

Gene sequence data has not been registered.